2 WGS vcfs are now available in HeartsMart: GMKF1.WGS.350.combined.hg19.vcf.gz contains GATK-processed WGS calls on 350 trios (SFARI controls were stripped out). GMKF2_Seidman_CongenitalHeartDisease_WGS.hg38.vcf.gz contains calls on 416 trios produced by the Broad Institute.
The related paper for these trios.
You can view the two VCF files by clicking on the query on your workspace.
Posted by xjerlmea on Jan. 18, 2022 at 10:16 p.m. ( permalink )